This document explains how you can quickly iterate your R code versions for an RStudio session on the Discovery HPC Cluster using a local code editor and remote HPC processing. This is helpful for exploring your data to refine the analysis you want to perform at scale on the HPC cluster.
The iterative process:
- SMB mount the DartFS directory you want to work with
- use RStudio locally
The development to test workflow is:
- Have a terminal window available on a submit node
- Edit your SMB-mounted file(s) locally in RStudio
-
Cmd+S to save
Cmd+Tab to switch to the terminal,. then submit a new job.